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Strategic Audit

Automatically generated audit for papers outside the top-ranked set.

A1. Included-holdout papers in corpus but outside top-500 (1)

Rank Category Title DOI
1977 biology Comparative connectomics reveals noncanonical wiring for color vision in human foveal retina 10.1073/pnas.2300545120

A2. Included-holdout papers missing from corpus (3)

Category Title DOI
analysis The connectome predicts resting state functional connectivity across the Drosophila brain 10.1016/j.cub.2021.09.064
analysis Hierarchical communities in the larval Drosophila connectome 10.1038/s41593-024-01716-8
analysis Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster 10.1038/s41586-024-07432-x

B. High in-degree omissions outside top-500 (200)

Rank In-degree Citations Domain Year Title
894 263 30680 unknown 1974 THE GENETICS OF CAENORHABDITIS ELEGANS
891 259 85618 network_science 1998 Collective dynamics of ‘small-world’ networks
545 144 72200 unknown 1999 Emergence of Scaling in Random Networks
530 106 1092 em_connectomics 2009 Eight different types of dopaminergic neurons innervate the Drosophila mushroom body neuropil: anatomical and physiological heterogeneity
524 95 1554 unknown 2015 Neural dynamics for landmark orientation and angular path integration
987 92 362 unknown 2006 Automating the Collection of Ultrathin Serial Sections for Large Volume TEM Reconstructions
516 86 3249 neuroscience 1989 Dendritic spines of CA 1 pyramidal cells in the rat hippocampus: serial electron microscopy with reference to their biophysical characteristics
534 86 1612 em_connectomics 1975 Electron microscopical reconstruction of the anterior sensory anatomy of the nematode caenorhabditis elegans
999 80 2416 unknown 1998 Cortex: Statistics and Geometry of Neuronal Connectivity
562 79 722 neuroscience 2005 Punishment Prediction by Dopaminergic Neurons in Drosophila
719 78 14972 methods_ml 2016 3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation
508 77 1110 neuroscience 2011 Dense, Unspecific Connectivity of Neocortical Parvalbumin-Positive Interneurons: A Canonical Microcircuit for Inhibition?
531 77 350 methods_ml 2017 Multicut brings automated neurite segmentation closer to human performance
640 75 540 unknown 2018 Genetic Reagents for Making Split-GAL4 Lines in Drosophila
599 73 15228 network_science 2001 Efficient Behavior of Small-World Networks
543 72 921 neuroscience 2017 Do the right thing: neural network mechanisms of memory formation, expression and update in Drosophila
544 66 544 neuroscience 2015 Sweet Taste and Nutrient Value Subdivide Rewarding Dopaminergic Neurons in Drosophila
505 63 1124 neuroscience 1999 The Fundamental Role of Pirouettes inCaenorhabditis elegansChemotaxis
511 62 363 em_connectomics 2017 Conserved neural circuit structure across Drosophila larval development revealed by comparative connectomics
597 62 5289 neuroscience 2015 The connectomics of brain disorders
502 61 332 em_connectomics 2016 Synaptic transmission parallels neuromodulation in a central food-intake circuit
603 61 2962 unknown 2010 Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons
556 60 1158 methods_ml 2015 Whole-brain activity mapping onto a zebrafish brain atlas
602 60 672 em_connectomics 2018 Cellular diversity in the Drosophila midbrain revealed by single-cell transcriptomics
659 60 474 neuroscience 2007 GABAergic Neurons Are Less Selective to Stimulus Orientation than Excitatory Neurons in Layer II/III of Visual Cortex, as Revealed byIn VivoFunctional Ca2+Imaging in Transgenic Mice
520 59 558 neuroscience 2014 A spike-timing mechanism for action selection
512 58 860 unknown 2015 Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans
542 58 358 em_connectomics 2015 Reward signal in a recurrent circuit drives appetitive long-term memory formation
563 58 468 neuroscience 2014 Neural correlates of water reward in thirsty Drosophila
624 58 590 neuroscience 2013 Reinforcement signalling in Drosophila; dopamine does it all after all
631 58 3548 neuroscience 2011 How Inhibition Shapes Cortical Activity
655 58 872 em_connectomics 1995 Synaptic code for sensory modalities revealed by C. elegans GLR-1 glutamate receptor
1274 58 46108 unknown 1952 A quantitative description of membrane current and its application to conduction and excitation in nerve
705 57 6198 unknown 2002 Specificity and Stability in Topology of Protein Networks
501 56 14394 unknown 2008 Exploring Network Structure, Dynamics, and Function using NetworkX
506 56 522 em_connectomics 2009 A map of octopaminergic neurons in the Drosophila brain
546 56 566 neuroscience 2011 An Imbalancing Act: Gap Junctions Reduce the Backward Motor Circuit Activity to Bias C. elegans for Forward Locomotion
666 56 1180 unknown 1975 Normal and mutant thermotaxis in the nematode Caenorhabditis elegans.
1000 56 940 unknown 1990 Neuronal architecture of the antennal lobe in Drosophila melanogaster
518 55 856 unknown 2010 Efficient Physical Embedding of Topologically Complex Information Processing Networks in Brains and Computer Circuits
1264 54 2812 methods_ml 2014 Directed evolution of APEX2 for electron microscopy and proximity labeling
526 53 2406 mri_connectomics 2009 Whole-brain anatomical networks: Does the choice of nodes matter?
619 53 336 neuroscience 2015 A Higher Brain Circuit for Immediate Integration of Conflicting Sensory Information in Drosophila
1068 53 109724 unknown 2004 Distinctive Image Features from Scale-Invariant Keypoints
1077 53 2672 unknown 2003 In vivo two-photon calcium imaging of neuronal networks
600 52 1846 unknown 1986 Mutant sensory cilia in the nematode Caenorhabditis elegans
650 52 440 neuroscience 2016 Memory-Relevant Mushroom Body Output Synapses Are Cholinergic
782 52 2392 unknown 2013 Cortical interneurons that specialize in disinhibitory control
521 51 506 neuroscience 2010 Response Features of Parvalbumin-Expressing Interneurons Suggest Precise Roles for Subtypes of Inhibition in Visual Cortex
559 51 1622 unknown 2006 Chemosensation in C. elegans
581 51 696 neuroscience 2009 Olfactory Information Processing in Drosophila
607 51 4510 mri_connectomics 1997 The columnar organization of the neocortex
1276 51 3912 unknown 1996 Chaos in Neuronal Networks with Balanced Excitatory and Inhibitory Activity
548 50 1458 neuroscience 2007 NeuroMorpho.Org: A Central Resource for Neuronal Morphologies
561 50 218 em_connectomics 2019 Functional and anatomical specificity in a higher olfactory centre
568 50 758 neuroscience 2019 Chemoconnectomics: Mapping Chemical Transmission in Drosophila
583 50 1090 unknown 2010 Dendritic organization of sensory input to cortical neurons in vivo
598 50 806 neuroscience 2016 High-Throughput Mapping of Single-Neuron Projections by Sequencing of Barcoded RNA
536 49 1026 unknown 1993 The GABAergic nervous system of Caenorhabditis elegans
616 49 854 neuroscience 2007 Sequential Use of Mushroom Body Neuron Subsets during Drosophila Odor Memory Processing
625 49 873 methods_ml 2011 mGRASP enables mapping mammalian synaptic connectivity with light microscopy
635 49 584 neuroscience 2015 Feedback from Network States Generates Variability in a Probabilistic Olfactory Circuit
646 49 374 em_connectomics 2015 A neural command circuit for grooming movement control
1113 49 666 unknown 1976 The projection of the lateral geniculate nucleus to area 17 of the rat cerebral cortex. I. General description
528 48 1269 unknown 2003 Functional mapping of neurons that control locomotory behavior in Caenorhabditis elegans
549 48 816 em_connectomics 2016 Species-specific wiring for direction selectivity in the mammalian retina
641 48 430 unknown 2007 Supervised Learning of Image Restoration with Convolutional Networks
685 48 226 neuroscience 2016 Four Individually Identified Paired Dopamine Neurons Signal Reward in Larval Drosophila
722 48 1304 neuroscience 2012 Parvalbumin-Expressing Interneurons Linearly Transform Cortical Responses to Visual Stimuli
574 47 392 em_connectomics 2009 The Role of Dopamine in Drosophila Larval Classical Olfactory Conditioning
682 47 902 methods_ml 2013 Improved tools for the Brainbow toolbox
686 47 1662 neuroscience 2007 Ultrastructure of dendritic spines: correlation between synaptic and spine morphologies
701 47 2072 em_connectomics 2019 CaImAn an open source tool for scalable calcium imaging data analysis
731 47 4641 neuroscience 2002 Protoplasmic Astrocytes in CA1 Stratum Radiatum Occupy Separate Anatomical Domains
810 47 372 neuroscience 2015 Two Independent Mushroom Body Output Circuits Retrieve the Six Discrete Components of Drosophila Aversive Memory
533 46 916 neuroscience 2007 Supralinear increase of recurrent inhibition during sparse activity in the somatosensory cortex
579 46 2028 unknown 1995 Recurrent Excitation in Neocortical Circuits
693 46 952 unknown 2013 The emergence of functional microcircuits in visual cortex
717 46 452 unknown 2011 Normalization for Sparse Encoding of Odors by a Wide-Field Interneuron
729 46 1743 neuroscience 2012 The Brain Activity Map Project and the Challenge of Functional Connectomics
812 46 682 mri_connectomics 2015 Generative models of the human connectome
1163 46 1170 unknown 1973 Chemotaxis by the Nematode Caenorhabditis elegans: Identification of Attractants and Analysis of the Response by Use of Mutants
1227 46 2898 neuroscience 2004 Sparse coding of sensory inputs
509 45 636 neuroscience 2011 The Neural Circuits and Synaptic Mechanisms Underlying Motor Initiation in C. elegans
541 45 546 neuroscience 2013 System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes
551 45 287 em_connectomics 2017 SynEM, automated synapse detection for connectomics
668 45 308 neuroscience 2019 A Neural Circuit Arbitrates between Persistence and Withdrawal in Hungry Drosophila
759 45 1828 unknown 1975 The dauerlarva, a post-embryonic developmental variant of the nematode Caenorhabditis elegans
1350 45 3448 unknown 2009 The human brain in numbers: a linearly scaled-up primate brain
515 44 2334 unknown 2014 Interneuron cell types are fit to function
651 44 1188 unknown 1980 The Caenorhabditis elegans male: Postembryonic development of nongonadal structures
874 44 768 unknown 2012 Simple models of human brain functional networks
525 43 120 neuroscience 2019 Convolutional nets for reconstructing neural circuits from brain images acquired by serial section electron microscopy
702 43 375 neuroscience 2018 Communication from Learned to Innate Olfactory Processing Centers Is Required for Memory Retrieval in Drosophila
715 43 1202 unknown 2012 Division and subtraction by distinct cortical inhibitory networks in vivo
735 43 2024 unknown 2006 Detecting rich-club ordering in complex networks
773 43 974 em_connectomics 1975 Dopaminergic neurons in the nematode Caenorhabditis elegans
776 43 1426 methods_ml 2016 Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies
865 43 736 neuroscience 2008 A Presynaptic Gain Control Mechanism Fine-Tunes Olfactory Behavior
975 43 1630 neuroscience 2013 A disinhibitory circuit mediates motor integration in the somatosensory cortex
1189 43 76680 unknown 2007 Matplotlib: A 2D Graphics Environment
591 42 5536 mri_connectomics 2012 The Human Connectome Project: A data acquisition perspective
629 42 598 neuroscience 1999 Neuronal Control of Locomotion in C. elegans Is Modified by a Dominant Mutation in the GLR-1 Ionotropic Glutamate Receptor
689 42 1492 unknown 1983 EGG-LAYING DEFECTIVE MUTANTS OF THE NEMATODE CAENORHABDITIS ELEGANS
694 42 255 neuroscience 2017 Electron Microscopic Reconstruction of Functionally Identified Cells in a Neural Integrator
714 42 198 methods_ml 2019 Gas cluster ion beam SEM for imaging of large tissue samples with 10 nm isotropic resolution
1254 42 7716 em_connectomics 1997 Regulation of Synaptic Efficacy by Coincidence of Postsynaptic APs and EPSPs
572 41 2356 unknown 2011 Brain Graphs: Graphical Models of the Human Brain Connectome
584 41 1064 methods_ml 2015 Correlated light and electron microscopy: ultrastructure lights up!
609 41 792 em_connectomics 1989 Density of neurons and synapses in the cerebral cortex of the mouse
638 41 308 em_connectomics 2019 Nitric oxide acts as a cotransmitter in a subset of dopaminergic neurons to diversify memory dynamics
767 41 152 em_connectomics 2010 The Viking viewer for connectomics: scalable multi‐user annotation and summarization of large volume data sets
772 41 376 em_connectomics 2012 Compartmentalized calcium dynamics in a C. elegans interneuron encode head movement
820 41 862 em_connectomics 2011 Visual place learning in Drosophila melanogaster
1003 41 291 neuroscience 2018 Connectomics and function of a memory network: the mushroom body of larval Drosophila
513 40 6158 network_science 2000 Classes of small-world networks
537 40 4150 unknown 2008 Neuronal Diversity and Temporal Dynamics: The Unity of Hippocampal Circuit Operations
564 40 282 em_connectomics 2018 Convergence of monosynaptic and polysynaptic sensory paths onto common motor outputs in a Drosophila feeding connectome
566 40 412 neuroscience 2016 Elucidating the Neuronal Architecture of Olfactory Glomeruli in the Drosophila Antennal Lobe
573 40 9474 neuroscience 1998 Synaptic Modifications in Cultured Hippocampal Neurons: Dependence on Spike Timing, Synaptic Strength, and Postsynaptic Cell Type
639 40 902 neuroscience 2007 Functional maps of neocortical local circuitry
734 40 314 em_connectomics 2019 Comparisons between the ON- and OFF-edge motion pathways in the Drosophila brain
784 40 942 neuroscience 1997 Reprogramming Chemotaxis Responses: Sensory Neurons Define Olfactory Preferences in C. elegans
833 40 184 em_connectomics 2016 Reconstruction of genetically identified neurons imaged by serial-section electron microscopy
519 39 486 neuroscience 2010 Visual Representations by Cortical Somatostatin Inhibitory Neurons—Selective But with Weak and Delayed Responses
557 39 315 em_connectomics 2015 Extracellular space preservation aids the connectomic analysis of neural circuits
569 39 2038 unknown 1979 Morphology and intracortical projections of functionally characterised neurones in the cat visual cortex
587 39 6910 mri_connectomics 2011 Functional and Effective Connectivity: A Review
623 39 528 neuroscience 2005 Geometric and functional organization of cortical circuits
632 39 624 mri_connectomics 2011 Cell Type–Specific Three-Dimensional Structure of Thalamocortical Circuits in a Column of Rat Vibrissal Cortex
517 38 621 em_connectomics 2008 Synaptic circuits of the Drosophila optic lobe: The input terminals to the medulla
550 38 784 neuroscience 2007 Drosophila olfactory memory: single genes to complex neural circuits
578 38 286 neuroscience 2016 Weighing the Evidence in Peters’ Rule: Does Neuronal Morphology Predict Connectivity?
595 38 832 em_connectomics 2009 The neural basis of Drosophila gravity-sensing and hearing
604 38 252 em_connectomics 2017 Organization of the Drosophila larval visual circuit
606 38 174 em_connectomics 2018 NeuTu: Software for Collaborative, Large-Scale, Segmentation-Based Connectome Reconstruction
622 38 336 em_connectomics 2012 Sequencing the Connectome
626 38 2382 mri_connectomics 2013 Graph analysis of the human connectome: Promise, progress, and pitfalls
652 38 2058 unknown 2013 Cortical connectivity and sensory coding
656 38 320 neuroscience 2019 Neural Basis for Looming Size and Velocity Encoding in the Drosophila Giant Fiber Escape Pathway
783 38 1374 unknown 2009 GABAergic Hub Neurons Orchestrate Synchrony in Developing Hippocampal Networks
803 38 232 neuroscience 2018 The Organization of Projections from Olfactory Glomeruli onto Higher-Order Neurons
514 37 620 em_connectomics 2009 Specific synapses develop preferentially among sister excitatory neurons in the neocortex
535 37 316 neuroscience 2009 Visual Receptive Field Structure of Cortical Inhibitory Neurons Revealed by Two-Photon Imaging Guided Recording
576 37 2817 unknown 1998 Neurobiology of the Caenorhabditis elegans Genome
585 37 1434 methods_ml 2016 Multiplexed and scalable super-resolution imaging of three-dimensional protein localization in size-adjustable tissues
594 37 473 neuroscience 2018 Brain-wide Organization of Neuronal Activity and Convergent Sensorimotor Transformations in Larval Zebrafish
596 37 1218 unknown 2003 Two Dynamically Distinct Inhibitory Networks in Layer 4 of the Neocortex
608 37 282 neuroscience 2018 Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites
663 37 440 em_connectomics 2015 Whole-central nervous system functional imaging in larval Drosophila
675 37 452 unknown 2016 Robust registration of calcium images by learned contrast synthesis
678 37 597 em_connectomics 2009 Counting synapses using FIB/SEM microscopy: a true revolution for ultrastructural volume reconstruction
680 37 516 em_connectomics 2015 Single-cell–initiated monosynaptic tracing reveals layer-specific cortical network modules
697 37 1200 em_connectomics 2002 Directionally selective calcium signals in dendrites of starburst amacrine cells
736 37 224 unknown 2011 Are mushroom bodies cerebellum-like structures?
751 37 1948 unknown 2001 Total number and distribution of inhibitory and excitatory synapses on hippocampal CA1 pyramidal cells
757 37 216 unknown 2015 What the fly’s nose tells the fly’s brain
813 37 2806 unknown 2016 Suite2p: beyond 10,000 neurons with standard two-photon microscopy
834 37 832 neuroscience 2005 Tyramine Functions Independently of Octopamine in the Caenorhabditis elegans Nervous System
886 37 682 em_connectomics 1995 Mechanosensory signalling in C. elegans mediated by the GLR-1 glutamate receptor
1153 37 694 unknown 1966 A NEW STAINING METHOD (OTO) FOR ENHANCING CONTRAST OF LIPID-CONTAINING MEMBRANES AND DROPLETS IN OSMIUM TETROXIDE-FIXED TISSUE WITH OSMIOPHILIC THIOCARBOHYDRAZIDE (TCH)
1171 37 3166 unknown 1965 The mechanism of directionally selective units in rabbit’s retina.
510 36 183 unknown 2017 Learning from connectomics on the fly
540 36 390 neuroscience 2014 Structured Synaptic Connectivity between Hippocampal Regions
558 36 326 em_connectomics 2012 Serial Section Scanning Electron Microscopy (S3EM) on Silicon Wafers for Ultra-Structural Volume Imaging of Cells and Tissues
610 36 258 unknown 2019 Serial-section electron microscopy using automated tape-collecting ultramicrotome (ATUM)
665 36 722 neuroscience 1989 Pharyngeal pumping continues after laser killing of the pharyngeal nervous system of C. elegans
674 36 2080 unknown 1966 Organization of the primate retina: electron microscopy
774 36 632 neuroscience 2013 Modular Control of Glutamatergic Neuronal Identity in C. elegans by Distinct Homeodomain Proteins
1322 36 1268 unknown 1995 Histology Of The Nervous System
1365 36 14502 unknown 1973 Long‐lasting potentiation of synaptic transmission in the dentate area of the anaesthetized rabbit following stimulation of the perforant path
1422 36 2882 unknown 2003 Balanced inhibition underlies tuning and sharpens spike timing in auditory cortex
522 35 268 unknown 1980 A systematic approach to reconstructing microcircuitry by electron microscopy of serial sections
611 35 642 methods_ml 2015 BigDataViewer: visualization and processing for large image data sets
676 35 214 neuroscience 2010 DrosophilaLarvae Establish Appetitive Olfactory Memories via Mushroom Body Neurons of Embryonic Origin
679 35 604 neuroscience 1999 Lateral Signaling Mediated by Axon Contact and Calcium Entry Regulates Asymmetric Odorant Receptor Expression in C. elegans
681 35 1154 neuroscience 1996 odr-10 Encodes a Seven Transmembrane Domain Olfactory Receptor Required for Responses to the Odorant Diacetyl
683 35 520 em_connectomics 2014 Neuronal connectome of a sensory-motor circuit for visual navigation
747 35 240 neuroscience 2019 Neuronal cell types in the fly: single-cell anatomy meets single-cell genomics
789 35 1260 em_connectomics 1992 Three‐dimensional analysis of the structure and composition of CA3 branched dendritic spines and their synaptic relationships with mossy fiber boutons in the rat hippocampus
804 35 214 em_connectomics 2017 Reciprocal synapses between mushroom body and dopamine neurons form a positive feedback loop required for learning
829 35 262 em_connectomics 2018 MDN brain descending neurons coordinately activate backward and inhibit forward locomotion
879 35 908 neuroscience 1996 Mutations in a Cyclic Nucleotide–Gated Channel Lead to Abnormal Thermosensation and Chemosensation in C. elegans
893 35 747 em_connectomics 2015 Wiring cost and topological participation of the mouse brain connectome
913 35 262 em_connectomics 2016 Organization of descending neurons in Drosophila melanogaster
970 35 1754 unknown 2016 Small-World Brain Networks Revisited
539 34 436 em_connectomics 2017 EM connectomics reveals axonal target variation in a sequence-generating network
615 34 296 em_connectomics 2018 Building a functional connectome of the Drosophila central complex
628 34 1036 neuroscience 2011 Complementary Function and Integrated Wiring of the Evolutionarily DistinctDrosophilaOlfactory Subsystems
658 34 376 em_connectomics 2015 Temperature representation in the Drosophila brain
780 34 1666 unknown 2005 Pathogenic bacteria induce aversive olfactory learning in Caenorhabditis elegans
815 34 298 methods_ml 2012 Staining and embedding the whole mouse brain for electron microscopy
831 34 252 neuroscience 2016 Selective Inhibition Mediates the Sequential Recruitment of Motor Pools
832 34 740 unknown 1990 Effects of starvation and neuroactive drugs on feeding in Caenorhabditis elegans
857 34 861 neuroscience 2018 Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology
876 34 834 unknown 1991 Control of Larval Development by Chemosensory Neurons in Caenorhabditis elegans
1237 34 4788 unknown 1957 MODALITY AND TOPOGRAPHIC PROPERTIES OF SINGLE NEURONS OF CAT’S SOMATIC SENSORY CORTEX
1349 34 294 em_connectomics 2001 Cylindrical diameters method for calibrating section thickness in serial electron microscopy
554 33 190 unknown 2008 Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs
660 33 988 neuroscience 2018 Genetic Dissection of Neural Circuits: A Decade of Progress

C1. Tail papers (201-500): high citations + low composite (0)

None.

C2. Tail papers (201-500): off-topic (0)

None.

D. Tail papers in inner core but ranked low (153)

Rank K-core Score In-degree Citations Domain Year Title
203 26 0.8378 211 1743 em_connectomics 2015 A multilevel multimodal circuit enhances action selection in Drosophila
204 26 0.8376 61 1480 unknown 1999 Development of the Drosophila mushroom bodies: sequential generation of three distinct types of neurons from a neuroblast
220 26 0.8347 186 1506 em_connectomics 2014 Mushroom body output neurons encode valence and guide memory-based action selection in Drosophila
228 26 0.8327 76 2060 neuroscience 2005 Molecular, Anatomical, and Functional Organization of the Drosophila Olfactory System
234 26 0.8313 15 74 em_connectomics 2020 Presynaptic developmental plasticity allows robust sparse wiring of the Drosophila mushroom body
238 26 0.831 152 2622 neuroscience 2003 Mushroom body memoir: from maps to models
248 26 0.8288 177 1332 unknown 2015 Optimized tools for multicolor stochastic labeling reveal diverse stereotyped cell arrangements in the fly visual system
255 26 0.8274 10 80 em_connectomics 2022 Postsynaptic plasticity of cholinergic synapses underlies the induction and expression of appetitive and familiarity memories in Drosophila
274 26 0.8238 130 666 neuroscience 2016 NBLAST: Rapid, Sensitive Comparison of Neuronal Structure and Construction of Neuron Family Databases
277 26 0.8234 15 82 neuroscience 2020 The Wiring Logic of an Identified Serotonergic Neuron That Spans Sensory Networks
285 26 0.8218 138 992 neuroscience 2015 Coordinated and Compartmentalized Neuromodulation Shapes Sensory Processing in Drosophila
289 26 0.8212 13 93 em_connectomics 2021 Predictive olfactory learning in Drosophila
291 26 0.821 72 1152 em_connectomics 2008 Lateral presynaptic inhibition mediates gain control in an olfactory circuit
299 26 0.8193 17 130 em_connectomics 2021 Transsynaptic mapping of Drosophila mushroom body output neurons
301 26 0.819 111 1290 em_connectomics 2012 Layered reward signalling through octopamine and dopamine in Drosophila
308 26 0.818 90 644 em_connectomics 2013 Glutamate is an inhibitory neurotransmitter in the Drosophila olfactory system
313 26 0.8165 111 786 neuroscience 2015 Activity of Defined Mushroom Body Output Neurons Underlies Learned Olfactory Behavior in Drosophila
323 26 0.8153 13 38 em_connectomics 2021 The anterior paired lateral neuron normalizes odour-evoked activity in the Drosophila mushroom body calyx
325 26 0.8149 116 440 em_connectomics 2016 The wiring diagram of a glomerular olfactory system
344 26 0.8112 117 1296 neuroscience 2014 A Systematic Nomenclature for the Insect Brain
360 26 0.8089 97 738 em_connectomics 2018 The functional organization of descending sensory-motor pathways in Drosophila
363 26 0.8087 73 444 em_connectomics 2017 Wiring variations that enable and constrain neural computation in a sensory microcircuit
367 26 0.8083 58 774 neuroscience 2010 Diversity and wiring variability of olfactory local interneurons in the Drosophila antennal lobe
372 26 0.8077 99 690 neuroscience 2014 Sparse, decorrelated odor coding in the mushroom body enhances learned odor discrimination
375 26 0.8071 83 556 neuroscience 2011 Cellular-Resolution Population Imaging Reveals Robust Sparse Coding in the Drosophila Mushroom Body
381 26 0.8066 69 360 neuroscience 2013 Integration of the olfactory code across dendritic claws of single mushroom body neurons
391 26 0.8058 124 930 em_connectomics 2013 Random convergence of olfactory inputs in the Drosophila mushroom body
401 26 0.8042 49 456 neuroscience 2007 A Map of Olfactory Representation in the Drosophila Mushroom Body
404 26 0.8039 201 870 methods_ml 2009 CATMAID: collaborative annotation toolkit for massive amounts of image data
407 26 0.8036 53 374 em_connectomics 2012 Organization of antennal lobe‐associated neurons in adult Drosophila melanogaster brain
408 26 0.803 65 522 neuroscience 2008 The GABAergic anterior paired lateral neuron suppresses and is suppressed by olfactory learning
414 26 0.8023 7 50 unknown 2020 Multiple network properties overcome random connectivity to enable stereotypic sensory responses
415 26 0.8022 83 314 em_connectomics 2018 Functional architecture of reward learning in mushroom body extrinsic neurons of larval Drosophila
417 26 0.8019 120 764 neuroscience 2015 Heterosynaptic Plasticity Underlies Aversive Olfactory Learning in Drosophila
423 26 0.8012 14 116 unknown 2020 Cellular and circuit mechanisms of olfactory associative learning inDrosophila
426 26 0.8009 80 1240 neuroscience 2009 A Neural Circuit Mechanism Integrating Motivational State with Memory Expression in Drosophila
428 26 0.8002 64 376 em_connectomics 2019 Neurogenetic dissection of the Drosophila lateral horn reveals major outputs, diverse behavioural functions, and interactions with the mushroom body
430 26 0.8001 76 720 neuroscience 2018 Integration of Parallel Opposing Memories Underlies Memory Extinction
434 26 0.7996 44 196 em_connectomics 2012 Different classes of input and output neurons reveal new features in microglomeruli of the adult Drosophila mushroom body calyx
436 26 0.7992 66 804 neuroscience 2017 Optimal Degrees of Synaptic Connectivity
442 26 0.7981 31 256 neuroscience 2013 Different Kenyon Cell Populations Drive Learned Approach and Avoidance in Drosophila
456 26 0.7963 85 1208 neuroscience 2006 Light-Induced Activation of Distinct Modulatory Neurons Triggers Appetitive or Aversive Learning in Drosophila Larvae
458 26 0.7962 45 556 em_connectomics 2002 Synaptic organization of the mushroom body calyx in Drosophila melanogaster
464 26 0.7953 49 570 neuroscience 2004 Integration of Chemosensory Pathways in the Drosophila Second-Order Olfactory Centers
466 26 0.7949 74 452 neuroscience 2016 Aversive Learning and Appetitive Motivation Toggle Feed-Forward Inhibition in the Drosophila Mushroom Body
474 26 0.7939 16 116 em_connectomics 2023 Hierarchical architecture of dopaminergic circuits enables second-order conditioning in Drosophila
485 26 0.7916 78 528 neuroscience 2015 Olfactory learning skews mushroom body output pathways to steer behavioral choice in Drosophila
490 26 0.791 56 352 neuroscience 2008 Testing Odor Response Stereotypy in the Drosophila Mushroom Body
492 26 0.791 108 680 em_connectomics 2016 Dopaminergic neurons write and update memories with cell-type-specific rules
201 25 0.8381 189 1524 em_connectomics 2019 Dense connectomic reconstruction in layer 4 of the somatosensory cortex
202 25 0.8379 146 1548 em_connectomics 2012 The Connectome of a Decision-Making Neural Network
205 25 0.8376 195 4404 em_connectomics 2012 TrakEM2 Software for Neural Circuit Reconstruction
208 25 0.8365 131 1797 methods_ml 2013 From the connectome to brain function
209 25 0.8356 19 152 neuroscience 2023 Generating parallel representations of position and identity in the olfactory system
211 25 0.8355 14 150 em_connectomics 2020 The Drosophila Split Gal4 System for Neural Circuit Mapping
213 25 0.8355 247 8508 em_connectomics 2014 A mesoscale connectome of the mouse brain
215 25 0.8353 83 1161 unknown 2009 Convolutional Networks Can Learn to Generate Affinity Graphs for Image Segmentation
218 25 0.8348 107 1520 neuroscience 2008 GFP Reconstitution Across Synaptic Partners (GRASP) Defines Cell Contacts and Synapses in Living Nervous Systems
219 25 0.8348 23 137 neuroscience 2024 Fine-grained descending control of steering in walking Drosophila
223 25 0.8341 131 1220 em_connectomics 2015 Synaptic circuits and their variations within different columns in the visual system of Drosophila
224 25 0.834 117 655 neuroscience 2017 Micro-connectomics: probing the organization of neuronal networks at the cellular scale
229 25 0.8326 14 43 em_connectomics 2024 A comprehensive neuroanatomical survey of the Drosophila Lobula Plate Tangential Neurons with predictions for their optic flow sensitivity
232 25 0.8317 325 2802 em_connectomics 2011 Wiring specificity in the direction-selectivity circuit of the retina
233 25 0.8316 17 124 unknown 2023 Visual processing in the fly, from photoreceptors to behavior
237 25 0.8311 119 1012 em_connectomics 2014 Space–time wiring specificity supports direction selectivity in the retina
241 25 0.83 113 522 em_connectomics 2015 High‐resolution, high‐throughput imaging with a multibeam scanning electron microscope
243 25 0.8295 13 72 em_connectomics 2024 Comparative connectomics of the descending and ascending neurons of the Drosophila nervous system: stereotypy and sexual dimorphism
244 25 0.8294 80 618 neuroscience 2012 Structural neurobiology: missing link to a mechanistic understanding of neural computation
249 25 0.8286 82 434 neuroscience 2006 Uniform Serial Sectioning for Transmission Electron Microscopy
258 25 0.8269 98 705 em_connectomics 2018 VAST (Volume Annotation and Segmentation Tool): Efficient Manual and Semi-Automatic Labeling of Large 3D Image Stacks
259 25 0.8265 64 1556 em_connectomics 2010 An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-Assisted Serial Section Electron Microscopy
261 25 0.8263 18 90 em_connectomics 2024 Transforming descending input into behavior: The organization of premotor circuits in the Drosophila Male Adult Nerve Cord connectome
264 25 0.8255 23 132 neuroscience 2022 Descending neurons coordinate anterior grooming behavior in Drosophila
265 25 0.8253 66 361 methods_ml 2015 Large-scale automatic reconstruction of neuronal processes from electron microscopy images
268 25 0.825 79 1047 em_connectomics 2015 Crowdsourcing the creation of image segmentation algorithms for connectomics
269 25 0.8248 15 88 em_connectomics 2022 Descending neuron population dynamics during odor-evoked and spontaneous limb-dependent behaviors
270 25 0.8245 114 862 em_connectomics 2017 Enhanced FIB-SEM systems for large-volume 3D imaging
275 25 0.8236 79 556 neuroscience 2015 SegEM: Efficient Image Analysis for High-Resolution Connectomics
276 25 0.8235 107 1083 methods_ml 2012 Elastic volume reconstruction from series of ultra-thin microscopy sections
279 25 0.8227 19 78 em_connectomics 2022 Drosophila gustatory projections are segregated by taste modality and connectivity
280 25 0.8226 54 688 neuroscience 2008 3D structural imaging of the brain with photons and electrons
281 25 0.8224 100 618 methods_ml 2012 High-contrast en bloc staining of neuronal tissue for field emission scanning electron microscopy
282 25 0.8222 125 1182 unknown 2011 The Big and the Small: Challenges of Imaging the Brain’s Circuits
287 25 0.8216 64 534 neuroscience 2010 Semi-automated reconstruction of neural circuits using electron microscopy
290 25 0.821 14 78 em_connectomics 2020 Distinct subpopulations of mechanosensory chordotonal organ neurons elicit grooming of the fruit fly antennae
298 25 0.8196 18 76 em_connectomics 2025 Eye structure shapes neuron function in Drosophila motion vision
300 25 0.8192 204 2193 neuroscience 2008 Serial Section Scanning Electron Microscopy of Adult Brain Tissue Using Focused Ion Beam Milling
309 25 0.8176 70 596 methods_ml 2013 Why not connectomics?
311 25 0.8167 14 61 em_connectomics 2024 A split-GAL4 driver line resource for Drosophila neuron types
314 25 0.8165 17 108 em_connectomics 2024 Predicting visual function by interpreting a neuronal wiring diagram
316 25 0.8163 81 608 methods_ml 2017 Automated synaptic connectivity inference for volume electron microscopy
317 25 0.8158 70 343 unknown 2019 Automated Reconstruction of a Serial-Section EM Drosophila Brain with Flood-Filling Networks and Local Realignment
318 25 0.8158 63 330 neuroscience 2011 Large-Scale Automated Histology in the Pursuit of Connectomes
319 25 0.8157 51 699 neuroscience 2011 Wiring Economy and Volume Exclusion Determine Neuronal Placement in the Drosophila Brain
324 25 0.8149 52 435 neuroscience 2009 Reading the Book of Memory: Sparse Sampling versus Dense Mapping of Connectomes
331 25 0.8138 147 590 em_connectomics 2014 Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits
334 25 0.8132 82 462 em_connectomics 2017 The comprehensive connectome of a neural substrate for ‘ON’ motion detection in Drosophila
345 25 0.8111 67 1850 neuroscience 2017 Neuronal cell-type classification: challenges, opportunities and the path forward
347 25 0.8108 173 1614 neuroscience 2007 Array Tomography: A New Tool for Imaging the Molecular Architecture and Ultrastructure of Neural Circuits
349 25 0.8104 71 393 neuroscience 2018 Progress and remaining challenges in high-throughput volume electron microscopy
350 25 0.8104 17 215 unknown 2022 Structured cerebellar connectivity supports resilient pattern separation
355 25 0.8099 68 480 neuroscience 2016 Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila
358 25 0.8095 98 888 neuroscience 2016 The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus
365 25 0.8085 14 80 em_connectomics 2023 Global change in brain state during spontaneous and forced walk in Drosophila is composed of combined activity patterns of different neuron classes
368 25 0.8083 11 39 em_connectomics 2023 A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
369 25 0.8081 75 688 neuroscience 2016 Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb
370 25 0.808 38 332 neuroscience 2014 Toward large-scale connectome reconstructions
373 25 0.8077 54 592 neuroscience 2010 Machines that learn to segment images: a crucial technology for connectomics
377 25 0.807 116 1068 em_connectomics 2015 Large-volume en-bloc staining for electron microscopy-based connectomics
380 25 0.8068 71 880 methods_ml 2015 High-resolution whole-brain staining for electron microscopic circuit reconstruction
384 25 0.8065 62 546 neuroscience 2008 Ome sweet ome: what can the genome tell us about the connectome?
385 25 0.8065 53 1892 neuroscience 2006 Bruchpilot, a Protein with Homology to ELKS/CAST, Is Required for Structural Integrity and Function of Synaptic Active Zones in Drosophila
387 25 0.8062 13 81 unknown 2022 A Survey of Visualization and Analysis in High‐Resolution Connectomics
389 25 0.8058 47 771 unknown 2014 Discovery of Brainwide Neural-Behavioral Maps via Multiscale Unsupervised Structure Learning
390 25 0.8058 91 795 em_connectomics 2016 The CNS connectome of a tadpole larva of Ciona intestinalis (L.) highlights sidedness in the brain of a chordate sibling
394 25 0.8054 78 666 em_connectomics 2017 Superhuman Accuracy on the SNEMI3D Connectomics Challenge
398 25 0.8048 55 806 em_connectomics 2019 Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution
422 25 0.8013 12 75 em_connectomics 2024 Connectomic reconstruction predicts visual features used for navigation
424 25 0.8011 58 1059 unknown 2014 Exploring the third dimension: Volume electron microscopy comes of age
433 25 0.7996 37 352 neuroscience 2013 Systematic Analysis of Neural Projections Reveals Clonal Composition of the Drosophila Brain
441 25 0.7986 67 612 em_connectomics 2017 Axonal synapse sorting in medial entorhinal cortex
448 25 0.7974 54 408 em_connectomics 2016 A circuit mechanism for the propagation of waves of muscle contraction in Drosophila
453 25 0.7968 41 518 unknown 2006 The Drosophila Larva as a Model for Studying Chemosensation and Chemosensory Learning: A Review
462 25 0.7955 87 816 methods_ml 2017 webKnossos: efficient online 3D data annotation for connectomics
469 25 0.7945 11 168 unknown 2022 Endocrine cybernetics: neuropeptides as molecular switches in behavioural decisions
473 25 0.7941 55 638 unknown 2016 Volume scanning electron microscopy for imaging biological ultrastructure
476 25 0.7936 63 1233 em_connectomics 1991 Synaptic organization of columnar elements in the lamina of the wild type in Drosophila melanogaster
479 25 0.7932 62 446 neuroscience 2014 A GAL4 Driver Resource for Developmental and Behavioral Studies on the Larval CNS of Drosophila
480 25 0.7931 76 608 methods_ml 2015 Ultrastructurally smooth thick partitioning and volume stitching for large-scale connectomics
484 25 0.7924 10 46 em_connectomics 2024 Social state alters vision using three circuit mechanisms in Drosophila
214 24 0.8355 16 95 em_connectomics 2022 Synaptic counts approximate synaptic contact area in Drosophila
236 24 0.8311 19 134 em_connectomics 2022 Taste quality and hunger interactions in a feeding sensorimotor circuit
250 24 0.8286 60 1550 neuroscience 2008 Genetic Dissection of Neural Circuits
253 24 0.8284 87 4020 methods_ml 2009 Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators
260 24 0.8265 109 3750 unknown 2007 Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system
272 24 0.824 50 292 em_connectomics 2009 A Computational Framework for Ultrastructural Mapping of Neural Circuitry
284 24 0.8219 63 573 unknown 2011 Synthesis and 5α-Reductase Inhibitory Activity of C21 Steroids Having 1,4-diene or 4,6-diene 20-ones and 4-Azasteroid 20-Oximes
295 24 0.8199 15 117 methods_ml 2023 High-contrast en bloc staining of mouse whole-brain and human brain samples for EM-based connectomics
306 24 0.8181 79 2136 unknown 2012 Beyond the connectome: How neuromodulators shape neural circuits
312 24 0.8166 127 22221 network_science 2002 Network Motifs: Simple Building Blocks of Complex Networks
320 24 0.8156 35 332 neuroscience 2005 Glomerular Maps without Cellular Redundancy at Successive Levels of the Drosophila Larval Olfactory Circuit
330 24 0.8141 13 67 em_connectomics 2024 Whole-body connectome of a segmented annelid larva
335 24 0.8131 37 236 em_connectomics 2009 The Interscutularis Muscle Connectome
340 24 0.8118 13 112 em_connectomics 2021 A neuronal ensemble encoding adaptive choice during sensory conflict in Drosophila
341 24 0.8117 15 60 em_connectomics 2021 Permeabilization-free en bloc immunohistochemistry for correlative microscopy
354 24 0.8099 15 77 neuroscience 2021 The connectome predicts resting-state functional connectivity across the Drosophila brain
388 24 0.8058 70 1278 em_connectomics 2015 Ultrastructural analysis of adult mouse neocortex comparing aldehyde perfusion with cryo fixation
393 24 0.8055 71 630 neuroscience 2015 Connectomics-Based Analysis of Information Flow in the Drosophila Brain
419 24 0.8014 48 438 methods_ml 2010 As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets
421 24 0.8013 18 78 em_connectomics 2024 Connectomic reconstruction of a cortical column
429 24 0.8001 61 776 neuroscience 2016 From Cajal to Connectome and Beyond
452 24 0.797 11 75 neuroscience 2024 Predicting modular functions and neural coding of behavior from a synaptic wiring diagram
471 24 0.7944 11 84 em_connectomics 2023 Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila