Deck Spec: 07 Glia
Session
- Duration: 70 + 20 min
- Outcome: glia recognition checklist and adjudication notes
- Primary source:
course/source-ingest/microns-proofreading-glia-111821.pptx.md
- Figure source:
course/units/figures/07-glia-selected-v1.md
Slide production blocks
- Title and rationale
- Key message: glia labeling is core to connectome validity, not optional cleanup.
- Figure:
FIG-RIV-GLIA-S01-01
- Astrocyte morphology cues
- Key message: astrocyte context depends on process shape plus neighborhood.
- Figure:
FIG-RIV-GLIA-S03-01
- Microglia recognition cues
- Key message: surveillance morphology requires multi-slice confirmation.
- Figure:
FIG-RIV-GLIA-S09-01
- Oligodendrocyte and myelin context
- Key message: myelin-associated cues prevent neuron/glia boundary errors.
- Figure:
FIG-RIV-GLIA-S15-01
- Myelin-producing glia context panel
- Key message: local myelin architecture improves class confidence.
- Figure:
FIG-RIV-GLIA-S16-01
- Ambiguity classes and escalation rules
- Key message: classify uncertainty type before adjudication.
- Figure: reuse
FIG-RIV-GLIA-S09-01
- QC metrics for glia labeling
- Key message: track glia-vs-neuron boundary error rates by region.
- Figure: no new figure required (metrics table).
- Team operations
- Key message: second-pass review queue is mandatory for low-confidence calls.
- Failure modes
- Key message: over-calling microglia and under-reviewing glia cause graph distortions.
- Activity instructions
- Key message: classify two ambiguous regions with justification.
- Figure:
FIG-RIV-GLIA-S03-01
- Debrief
- Key message: glia corrections should be included in high-impact proofreading triage.
- Bridge to Unit 08
- Key message: segmentation/proofreading integrates all prior ambiguity protocols.
Assessment
- Prompt: provide two glia calls with evidence and uncertainty label.
- Rubric: class discrimination quality and justification strength.